CDS

Accession Number TCMCG005C36176
gbkey CDS
Protein Id XP_020250600.1
Location join(4991..5046,5135..5225,6104..6195,6271..6364,6456..6535,11039..11122,11289..11388,11892..11984)
Gene LOC109827982
GeneID 109827982
Organism Asparagus officinalis

Protein

Length 229aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA376608;
db_source XM_020395011.1
Definition probable U3 small nucleolar RNA-associated protein 11

EGGNOG-MAPPER Annotation

COG_category S
Description Involved in nucleolar processing of pre-18S ribosomal RNA
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14769        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009553        [VIEW IN EMBL-EBI]
GO:0009561        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032040        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGTCGCTTAGAAACGCAATCCCTAGAAGGGCTCACAAGGAGCGAGCCCAGCCTGAGGCGAGGAAGAAGTTTGGTATTCTGGAGAAGCATAAAGATTATGTTTTGCGAGCAAAAGCTTTTCACCAGAAGGAAGAGGCTCTAAGAAAATTGAAGGAGAAGGCAGAGTTCAGAAATCCTGATGAGTTCTACTTCAAGATGATCAACACTAAGACTATCAATGGGGTCCATAGGCCACCGAGTGAAGCAAACAAGTATACTCAAGAGGAGCTCATGCTAATGAAGACTCGGGATATGGGGTACATTCTTCAAAAAATTCAAAGTGAAAAGAAGAAAATTGAAAGATTGACTTCTGTACTCCATGCATTGGATAACCAGCCCCTGAACAAGCGTGTTTTCTATGCTGAAGACAGGGAAGAAGCCAAGGATATACGATCAAAATCACTTGAGAGGAGCAATTCACCTGTATTTAGAAACATGCCAAATAGAATAAAGAAGAGATCAGCTTGCTCATATGCAGAGGTAGAATCAAGAAAGCAGAGGGTTCAACAATTAGAAAAACTATACTCCGACATGGCTTTGCAGAAAGAACTACAGAAATCTGGCCGTAAGCACAAACTTCGTGAAGAAGAGTTGGTCTCCCCAACAAGTAGACCGGTCTACAAATGGCGTACAGAACGTAAACGATGA
Protein:  
MSSLRNAIPRRAHKERAQPEARKKFGILEKHKDYVLRAKAFHQKEEALRKLKEKAEFRNPDEFYFKMINTKTINGVHRPPSEANKYTQEELMLMKTRDMGYILQKIQSEKKKIERLTSVLHALDNQPLNKRVFYAEDREEAKDIRSKSLERSNSPVFRNMPNRIKKRSACSYAEVESRKQRVQQLEKLYSDMALQKELQKSGRKHKLREEELVSPTSRPVYKWRTERKR